STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoDPhosphodiesterase/alkaline phosphatase D. (513 aa)    
Predicted Functional Partners:
cce_3493
Probable alkaline phosphatase.
 
 
 0.941
cce_3495
Phytase.
 
  
0.928
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.918
folE2
GTP cyclohydrolase I.
    
 0.916
folE1
GTP cyclohydrolase I.
    
 0.916
ptpS
6-pyruvoyl tetrahydropterin synthase.
     
  0.900
cce_2115
Putative 6-pyruvoyl tetrahydrobiopterin synthase.
     
  0.900
cce_4372
Hypothetical protein; Contains DUF433.
       0.773
cce_4373
Hypothetical protein.
       0.773
cce_3578
DUF839-containing protein.
 
  
 0.742
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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