Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cce_0085 | cce_0812 | cce_0085 | cce_0812 | Hypothetical protein. | Hypothetical protein. | 0.468 |
cce_0085 | cce_0862 | cce_0085 | cce_0862 | Hypothetical protein. | Unknown. | 0.568 |
cce_0085 | cce_1914 | cce_0085 | cce_1914 | Hypothetical protein. | Unknown. | 0.670 |
cce_0085 | cce_4377 | cce_0085 | cce_4377 | Hypothetical protein. | DUF1092-containing protein. | 0.711 |
cce_0207 | cce_0812 | cce_0207 | cce_0812 | Conserved hypothetical protein. | Hypothetical protein. | 0.753 |
cce_0207 | cce_0862 | cce_0207 | cce_0862 | Conserved hypothetical protein. | Unknown. | 0.513 |
cce_0207 | cce_1914 | cce_0207 | cce_1914 | Conserved hypothetical protein. | Unknown. | 0.667 |
cce_0207 | cce_2694 | cce_0207 | cce_2694 | Conserved hypothetical protein. | Unknown; Contains a nucleic acid-binding, OB-fold domain. | 0.669 |
cce_0207 | cce_3689 | cce_0207 | cce_3689 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.616 |
cce_0207 | cce_4377 | cce_0207 | cce_4377 | Conserved hypothetical protein. | DUF1092-containing protein. | 0.695 |
cce_0812 | cce_0085 | cce_0812 | cce_0085 | Hypothetical protein. | Hypothetical protein. | 0.468 |
cce_0812 | cce_0207 | cce_0812 | cce_0207 | Hypothetical protein. | Conserved hypothetical protein. | 0.753 |
cce_0812 | cce_0862 | cce_0812 | cce_0862 | Hypothetical protein. | Unknown. | 0.466 |
cce_0812 | cce_1914 | cce_0812 | cce_1914 | Hypothetical protein. | Unknown. | 0.424 |
cce_0812 | cce_2694 | cce_0812 | cce_2694 | Hypothetical protein. | Unknown; Contains a nucleic acid-binding, OB-fold domain. | 0.671 |
cce_0812 | cce_3595 | cce_0812 | cce_3595 | Hypothetical protein. | Unknown. | 0.512 |
cce_0812 | cce_4377 | cce_0812 | cce_4377 | Hypothetical protein. | DUF1092-containing protein. | 0.739 |
cce_0812 | psbP | cce_0812 | cce_0804 | Hypothetical protein. | Photosystem II oxygen evolving complex protein PsbP, 23 kD extrinsic protein. | 0.400 |
cce_0862 | cce_0085 | cce_0862 | cce_0085 | Unknown. | Hypothetical protein. | 0.568 |
cce_0862 | cce_0207 | cce_0862 | cce_0207 | Unknown. | Conserved hypothetical protein. | 0.513 |
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