Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_2735 | cce_4417 | cce_2735 | cce_4417 | ATPase. | Lysine decarboxylase. | 0.729 |
| cce_3099 | cce_4417 | cce_3099 | cce_4417 | Aluminium resistance protein. | Lysine decarboxylase. | 0.779 |
| cce_3099 | mrnC | cce_3099 | cce_1800 | Aluminium resistance protein. | Putative Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.590 |
| cce_3099 | sepF | cce_3099 | cce_2614 | Aluminium resistance protein. | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.747 |
| cce_4416 | cce_4417 | cce_4416 | cce_4417 | Two-component response regulator. | Lysine decarboxylase. | 0.432 |
| cce_4417 | cce_2735 | cce_4417 | cce_2735 | Lysine decarboxylase. | ATPase. | 0.729 |
| cce_4417 | cce_3099 | cce_4417 | cce_3099 | Lysine decarboxylase. | Aluminium resistance protein. | 0.779 |
| cce_4417 | cce_4416 | cce_4417 | cce_4416 | Lysine decarboxylase. | Two-component response regulator. | 0.432 |
| cce_4417 | cce_5152 | cce_4417 | cce_5152 | Lysine decarboxylase. | Putative AAA ATPase, possibly membrane bound. | 0.532 |
| cce_4417 | mrnC | cce_4417 | cce_1800 | Lysine decarboxylase. | Putative Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.495 |
| cce_4417 | sepF | cce_4417 | cce_2614 | Lysine decarboxylase. | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.474 |
| cce_4417 | thrB | cce_4417 | cce_0510 | Lysine decarboxylase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.431 |
| cce_5152 | cce_4417 | cce_5152 | cce_4417 | Putative AAA ATPase, possibly membrane bound. | Lysine decarboxylase. | 0.532 |
| mrnC | cce_3099 | cce_1800 | cce_3099 | Putative Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | Aluminium resistance protein. | 0.590 |
| mrnC | cce_4417 | cce_1800 | cce_4417 | Putative Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | Lysine decarboxylase. | 0.495 |
| mrnC | sepF | cce_1800 | cce_2614 | Putative Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.655 |
| sepF | cce_3099 | cce_2614 | cce_3099 | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Aluminium resistance protein. | 0.747 |
| sepF | cce_4417 | cce_2614 | cce_4417 | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Lysine decarboxylase. | 0.474 |
| sepF | mrnC | cce_2614 | cce_1800 | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Putative Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.655 |
| thrB | cce_4417 | cce_0510 | cce_4417 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | Lysine decarboxylase. | 0.431 |