STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4422Unknown. (548 aa)    
Predicted Functional Partners:
cce_3345
Conserved hypothetical protein.
  
     0.684
cce_3225
Conserved hypothetical protein.
  
     0.678
cce_4688
Unknown.
  
     0.620
cce_3206
Hypothetical protein; Contains a CpcD phycobilisome linker-like domain.
  
     0.604
cce_1634
Conserved hypothetical protein.
  
     0.602
cce_2194
Conserved hypothetical protein.
  
     0.580
cce_4388
Fatty acid desaturase.
  
     0.579
cce_0534
Unknown.
  
     0.567
cce_3783
Hypothetical protein; Contains a DNA methylase N-4/N-6 domain.
    
 
 0.555
cce_0778
Unknown; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.547
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.