STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4430Putative sialidase. (783 aa)    
Predicted Functional Partners:
cce_1067
Unknown.
  
    0.685
cce_2366
Two-component sensor histidine kinase.
  
     0.600
cce_3206
Hypothetical protein; Contains a CpcD phycobilisome linker-like domain.
  
     0.580
cce_4431
Conserved hypothetical protein.
       0.580
cce_4429
Unknown.
       0.572
dpm1
Probable dolichyl-phosphate-mannose synthase.
  
     0.551
cce_4049
acyl-CoA dehydrogenase.
  
     0.531
cce_1410
Hypothetical protein; Contains a HTTM domain.
  
     0.519
cce_3496
Putative cyanophycinase; Belongs to the peptidase S51 family.
  
     0.509
cce_1036
Unknown.
  
     0.499
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.