Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_4457Unknown; Contains a Type I phosphodiesterase/nucleotide pyrophosphatase domain. (464 aa)    
Predicted Functional Partners:
cce_4456
Unknown.
 
   
 0.946
aroB2
3-dehydroquinate synthase.
 
     0.930
cce_4454
Hypothetical protein; Contains a UbiA prenyltransferase domain.
 
   
 0.900
cce_4452
Conserved hypothetical protein.
 
   
 0.880
cce_4453
Putative TatD DNase-like metal-dependent hydrolase.
 
   
 0.880
cce_4838
Putative TatD DNase-like metal-dependent hydrolase.
 
   
 0.817
cce_4494
Hypothetical protein.
   
 
  0.466
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.