STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4466Hypothetical protein. (126 aa)    
Predicted Functional Partners:
cce_4467
Hypothetical protein.
       0.782
vapB
Putative virulence associated protein B.
  
 
 0.760
cyl0017
Contains a PilT protein, N-terminal domain.
  
     0.675
cce_4468
Putative DNA methylase N-4/N-6; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.673
cce_1257
Unknown.
  
     0.663
cce_3069
Unknown.
  
     0.536
cce_3033
Hypothetical protein; Contains a serralysin-like metalloprotease, C-terminal domain.
  
     0.518
cce_0699
Hypothetical protein.
  
     0.426
cce_4469
Hypothetical protein; Contains a TPR-like helical domain.
 
     0.415
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.