Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_4521ATP-binding protein of branched-chain amino acid ABC transporter. (245 aa)    
Predicted Functional Partners:
cce_3156
Putative branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
cce_2946
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.983
natB
Probable ABC transporter periplasmic branched chain amino acid binding protein.
 
 
 0.982
natA
ATP-binding protein of ABC transporter.
 
 
0.980
cce_3012
Unknown; Contains an extracellular ligand-binding receptor domain.
 
  
 0.864
cce_2277
Unknown; Contains an extracellular ligand-binding receptor domain.
 
  
 0.860
cce_3641
ATP-binding protein of ABC transporter.
 
     
0.822
cce_4628
Unknown; Contains an extracellular ligand-binding receptor domain.
 
  
 0.791
cce_2230
ATP-binding protein of ABC transporter.
 
     
0.749
cce_4522
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.673
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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