STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4538Hypothetical protein. (550 aa)    
Predicted Functional Partners:
cce_1410
Hypothetical protein; Contains a HTTM domain.
  
     0.762
cce_4049
acyl-CoA dehydrogenase.
  
     0.757
cce_3002
Hypothetical protein.
  
     0.687
cce_3623
Putative membrane protein.
  
     0.596
cce_2799
Glycosyl transferase.
  
     0.588
cce_2800
Glycosyl transferase, group 1.
  
     0.576
cce_3014
Hypothetical protein; Contains a TPR-like helical domain.
  
     0.571
cofH
CHP423-containing protein; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.
       0.551
cce_4311
Hypothetical protein.
  
     0.509
cce_3526
Conserved hypothetical protein.
  
     0.506
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.