STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4556Unknown; Contains a heparan sulphate 6-sulfotransferase domain. (274 aa)    
Predicted Functional Partners:
cce_4555
Putative polysaccharide pyruvyl transferase.
       0.648
cce_4552
Unknown; Contains a Sulfotransferase domain.
 
     0.581
cce_4557
Glycosyl transferase, group 1.
       0.574
cce_4554
Unknown; Contains a nitroreductase domain.
       0.534
cce_4551
Unknown; Contains an ASPIC/UnbV domain.
 
     0.513
cce_4558
Glycosyl transferase, group 1.
       0.474
cce_4803
Contains a soluble quinoprotein glucose dehydrogenase domain.
  
     0.459
cce_4553
Unknown.
       0.446
cce_4526
Probable oxidoreductase, short chain dehydrogenase/reductase family.
  
     0.404
cce_0781
Unknown; Contains a bacterial regulatory factor, effector domain.
  
     0.400
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.