Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_4602Putative protein PspA/IM30. (231 aa)    
Predicted Functional Partners:
cce_1498
Nitrogen assimilation regulatory protein.
   
 
 0.785
cce_4601
Unknown; Contains a phospholipid/glycerol acyltransferase domain.
       0.773
cce_1185
Two-component hybrid sensor and regulator.
   
 
 0.691
cce_1777
Probable two-component hybrid sensor and regulator.
    
 
 0.690
cce_4337
Unknown; Contains a Band 7 domain.
  
  
 0.544
psb29
Photosystem II 22 kD protein; May be involved in photosynthetic membrane biogenesis.
  
   
 0.523
cce_4317
CheA signal transduction histidine kinase.
    
 
 0.507
cce_4603
Hypothetical protein.
       0.507
cce_0656
Two-component hybrid sensor and regulator.
    
   0.428
murJ
Virulence factor MviN-like protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
     
 0.407
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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