STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4623Putative Rieske [2Fe-2S] domain-containing cell death suppressor protein. (461 aa)    
Predicted Functional Partners:
cce_4624
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
       0.570
cce_4936
Hypothetical protein.
  
     0.510
cce_1807
PAP fibrillin.
  
     0.483
cce_4093
Unknown.
  
     0.476
cce_1718
Putative amidohydrolase.
  
     0.452
crtR
Beta-carotene hydroxylase.
       0.439
cce_1219
Hypothetical protein; Contains aYcfA domain.
  
     0.429
cce_0117
Hypothetical protein.
  
     0.420
cce_0815
Unknown.
  
     0.412
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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