Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cce_4625Hypothetical protein; Contains Endonuclease/exonuclease/phosphatase and Serralysin-like metalloprotease, C-terminal domains. (1252 aa)    
Predicted Functional Partners:
cce_4621
Putative alkaline phosphatase; Belongs to the 5'-nucleotidase family.
   
 0.957
cce_3016
Alkaline phosphatase.
 
     0.941
cce_1120
Putative phytase.
     0.873
cce_3495
Phytase.
  
 0.575
cce_3494
Glycerophosphoryl diester phosphodiesterase; Belongs to the alkaline phosphatase family.
  
 0.490
cce_0271
Probable alpha amylase.
  
     0.455
cce_3941
Alpha amylase.
  
     0.454
cce_5137
Putative nuclease.
     
 0.453
cce_3790
Unknown.
  
     0.432
gor
Glutathione reductase; Maintains high levels of reduced glutathione.
       0.410
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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