STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_4643Hypothetical protein. (999 aa)    
Predicted Functional Partners:
cce_3521
Glycerophosphoryl diester phosphodiesterase.
 
 
    0.790
cce_3016
Alkaline phosphatase.
 
      0.771
cce_1120
Putative phytase.
   
 0.711
cce_3494
Glycerophosphoryl diester phosphodiesterase; Belongs to the alkaline phosphatase family.
  
  
 0.707
cce_3495
Phytase.
 
  
0.638
cce_1925
Contains a GTP-binding protein, HSR1-related domain.
  
     0.449
cce_4642
Probable alkaline phosphatase.
  
  
 0.437
cce_0280
Unknown.
  
     0.411
cce_0635
Hypothetical protein.
  
     0.411
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.