Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_4648Hypothetical protein; Contains photosynthetic reaction center H-chain cytoplasmic and CHP2271 C-terminal domains. (279 aa)    
Predicted Functional Partners:
cce_1796
Conserved hypothetical protein.
  
   
 0.780
cce_1795
Conserved hypothetical protein.
  
     0.775
cce_2502
Putative CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
    0.757
cce_2506
Unknown.
  
     0.756
cce_2511
Hypothetical protein.
 
   
 0.755
cce_3455
Putative CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
    0.750
cce_0177
Putative CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
    0.745
cce_2045
Unknown; Contains a TPR-like helical domain.
  
     0.727
cce_0221
Hypothetical protein; Contains a Rhodanese-like domain.
  
     0.726
cce_4731
Hypothetical protein; Contains a metallophosphoesterase domain.
  
     0.724
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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