STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4714Two-component response regulator, NarL subfamily. (294 aa)    
Predicted Functional Partners:
cce_1185
Two-component hybrid sensor and regulator.
  
 
 0.816
kaiB2
Putative circadian clock protein.
 
     0.806
cce_0656
Two-component hybrid sensor and regulator.
  
 
 0.790
cce_2232
Two-component sensor histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.702
kaiC2
Circadian clock protein.
 
     0.698
cce_4317
CheA signal transduction histidine kinase.
 
 
 0.682
cce_1777
Probable two-component hybrid sensor and regulator.
  
 
 0.652
cce_1982
CheY-like two-component hybrid sensor and regulator.
  
 
   0.648
cce_0164
Two-component sensor histidine kinase.
  
 
 0.620
cce_4289
Two-component hybrid sensor and regulator.
  
 
 0.620
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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