STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4732DUF839-containing protein. (738 aa)    
Predicted Functional Partners:
cce_3494
Glycerophosphoryl diester phosphodiesterase; Belongs to the alkaline phosphatase family.
 
  
 0.818
cce_4642
Probable alkaline phosphatase.
 
  
 0.602
cce_5036
Hypothetical protein; Contains a GCN5-related N-acetyltransferase domain.
  
     0.481
cce_0992
Conserved hypothetical protein.
  
     0.475
cce_2307
Unknown; Contains a plasmid stabilization system domain.
  
     0.473
cce_3495
Phytase.
  
  
 0.470
cce_3248
acyl-CoA dehydrogenase family protein.
  
     0.465
cce_1194
Hypothetical protein; Contains a CRISPR-associated helicase Cas3, core domain.
  
     0.453
cce_2306
Unknown.
  
     0.442
cce_1196
Putative CRISPR-associated negative autoregulator.
  
     0.435
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.