STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4759Putative haem peroxidase. (586 aa)    
Predicted Functional Partners:
trxM2
Thioredoxin M; Belongs to the thioredoxin family.
      
 0.673
opcA
OxPPCycle protein.
      
 0.672
trxM1
Thioredoxin M; Belongs to the thioredoxin family.
      
 0.670
cce_2089
Hypothetical protein; Contains a serralysin-like metalloprotease, C-terminal and PKD domains.
  
     0.631
cce_3126
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
      
 0.617
cce_4332
Hemolysin-type calcium-binding protein.
 
     0.577
cce_5143
Contains low-density lipoprotein receptor YWTD repeat domains.
  
     0.560
cce_3738
Putative phosphorylase kinase.
  
     0.479
cce_4269
Probable sulfotransferase.
  
     0.464
cce_4223
Hypothetical protein; Contains a neurotransmitter-gated ion-channel domain.
  
     0.455
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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