Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_4796Putative peptidase; Belongs to the peptidase S8 family. (889 aa)    
Predicted Functional Partners:
cce_3058
Hypothetical protein.
 
 
 0.722
cce_5157
Hypothetical protein.
 
  
 0.712
cce_4797
Hypothetical protein.
       0.655
cce_4177
Hypothetical protein; Contains a GGDEF domain, Forkhead-associated domain, EAL domain, SMAD/FHA domain, and a PAS fold domain.
  
  
 0.642
cce_4651
Hypothetical protein; Contains an EAL signaling domain.
  
  
 0.642
cce_3210
Unknown.
 
 
 0.619
cce_4176
Hypothetical protein; Contains a GGDEF domain, Forkhead-associated domain, EAL domain, and SMAD/FHA domain.
  
  
 0.609
cce_4650
Hypothetical protein; Contains a GGDEF domain, Forkhead-associated domain, EAL domain, and SMAD/FHA domain.
  
  
 0.609
cce_4836
Unknown; Contains DUF820.
  
     0.591
cce_0593
Protease; Belongs to the peptidase S8 family.
  
    0.571
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.