Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_4836Unknown; Contains DUF820. (184 aa)    
Predicted Functional Partners:
cce_0111
Hypothetical protein; Contains DUF820.
  
     0.773
cce_3247
Hypothetical protein; Contains DUF820.
  
     0.726
moaB1
Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.693
cce_1405
Hypothetical protein; Contains DUF820.
  
     0.655
cce_4796
Putative peptidase; Belongs to the peptidase S8 family.
  
     0.591
cce_2030
Hypothetical protein.
  
     0.586
thrS3
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.586
cce_2031
Hypothetical protein.
  
     0.534
cce_3367
Hypothetical protein; Contains DUF433.
  
     0.523
cce_2945
Contains a secretion protein HlyD domain.
  
     0.521
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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