STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4884Chromosome partitioning protein, ParB family; Belongs to the ParB family. (313 aa)    
Predicted Functional Partners:
cce_4883
Unknown; Contains a cobyrinic acid a,c-diamide synthase domain.
 
 
 0.915
cce_5032
Putative cobyrinic acid a,c-diamide synthase.
 
 0.912
cce_5153
Probable chromosome partitioning protein, ParA family.
 
 
 0.870
cce_3374
Unknown; Contains a Cobyrinic acid a,c-diamide synthase domain.
 
 
 0.842
cce_4885
DUF77-containing protein.
       0.778
cce_1550
Unknown.
 
 0.771
cce_4120
Unknown; Contains a cobyrinic acid a,c-diamide synthase domain.
 
 
 0.744
cce_2154
Putative regulatory protein cII.
 
 
 0.696
gidB
Glucose inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.672
cce_4882
Hypothetical protein.
       0.544
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.