STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4906Hypothetical protein. (170 aa)    
Predicted Functional Partners:
cce_0687
Hypothetical protein.
  
     0.706
cce_3619
Hypothetical protein.
  
     0.504
cce_0089
CHP1784-containing protein.
  
     0.464
cce_1984
Unknown; Contains DUF820.
  
     0.461
cce_2149
Unknown; Contains DUF820.
  
     0.454
cce_1711
CHP1784-containing protein.
  
     0.453
mocD
Putative hydrocarbon oxygenase.
  
     0.437
cce_2866
Hypothetical protein; Contains DUF891.
  
     0.436
cce_1974
Hypothetical protein.
  
     0.418
cce_1224
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.407
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.