STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xerCIntegrase-recombinase protein; Belongs to the 'phage' integrase family. (316 aa)    
Predicted Functional Partners:
cce_5158
Probable integrase/recombinase.
  
     0.736
cce_5039
Integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.735
cce_1157
Hypothetical protein; Contains DUF6, transmembrane.
  
     0.510
cce_5153
Probable chromosome partitioning protein, ParA family.
  
     0.470
cyl0021
Hypothetical protein; Contains a phosphoribosyltransferase domain.
   
    0.437
cce_4660
Hypothetical protein; Contains a WD-repeat, a PAS region and a response regulator receiver domain.
 
    0.428
cce_2618
Probable fatty acid desaturase.
  
     0.418
cce_4923
Putative PemK-like protein; Toxic component of a type II toxin-antitoxin (TA) system.
       0.418
cce_4924
Hypothetical protein; Contains a ribbon-helix-helix domain.
       0.418
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.412
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.