Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bvdR | cce_4399 | cce_1608 | cce_4399 | Oxidoreductase, putative biliverdin reductase. | Probable oxidoreductase. | 0.600 |
| bvdR | cce_4955 | cce_1608 | cce_4955 | Oxidoreductase, putative biliverdin reductase. | Hypothetical protein. | 0.760 |
| bvdR | rbsK | cce_1608 | cce_1861 | Oxidoreductase, putative biliverdin reductase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.499 |
| cce_0799 | cce_4955 | cce_0799 | cce_4955 | Oxidoreductase. | Hypothetical protein. | 0.760 |
| cce_0799 | cscK | cce_0799 | cce_4168 | Oxidoreductase. | Fructokinase. | 0.432 |
| cce_1611 | cce_4955 | cce_1611 | cce_4955 | Putative carbohydrate kinase, PfkB family. | Hypothetical protein. | 0.610 |
| cce_2684 | cce_4399 | cce_2684 | cce_4399 | Putative PfkB. | Probable oxidoreductase. | 0.406 |
| cce_2684 | cce_4955 | cce_2684 | cce_4955 | Putative PfkB. | Hypothetical protein. | 0.610 |
| cce_3750 | cce_4955 | cce_3750 | cce_4955 | Unknown; Contains an oxidoreductase domain. | Hypothetical protein. | 0.760 |
| cce_4399 | bvdR | cce_4399 | cce_1608 | Probable oxidoreductase. | Oxidoreductase, putative biliverdin reductase. | 0.600 |
| cce_4399 | cce_2684 | cce_4399 | cce_2684 | Probable oxidoreductase. | Putative PfkB. | 0.406 |
| cce_4399 | cce_4955 | cce_4399 | cce_4955 | Probable oxidoreductase. | Hypothetical protein. | 0.760 |
| cce_4399 | cscK | cce_4399 | cce_4168 | Probable oxidoreductase. | Fructokinase. | 0.450 |
| cce_4399 | rbsK | cce_4399 | cce_1861 | Probable oxidoreductase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.423 |
| cce_4954 | cce_4955 | cce_4954 | cce_4955 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| cce_4954 | cce_4956 | cce_4954 | cce_4956 | Hypothetical protein. | Hypothetical protein. | 0.590 |
| cce_4955 | bvdR | cce_4955 | cce_1608 | Hypothetical protein. | Oxidoreductase, putative biliverdin reductase. | 0.760 |
| cce_4955 | cce_0799 | cce_4955 | cce_0799 | Hypothetical protein. | Oxidoreductase. | 0.760 |
| cce_4955 | cce_1611 | cce_4955 | cce_1611 | Hypothetical protein. | Putative carbohydrate kinase, PfkB family. | 0.610 |
| cce_4955 | cce_2684 | cce_4955 | cce_2684 | Hypothetical protein. | Putative PfkB. | 0.610 |
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