STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_5000Putative plasmid maintenance toxin/cell growth inhibitor. (114 aa)    
Predicted Functional Partners:
psbB
Photosystem II CP47 protein, 47 kD chlorophyll-binding protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.
    
   0.823
cce_5001
Unknown.
       0.773
mazE
Putative cell growth regulatory protein.
  
 
 0.768
cce_5002
Hypothetical protein; Contains DUF1568.
       0.651
cce_2859
Hypothetical protein.
  
 
 0.607
cce_4924
Hypothetical protein; Contains a ribbon-helix-helix domain.
  
 
 0.607
cce_1102
Putative helicase.
  
     0.535
cce_4998
Contains a PilT protein, N-terminal domain.
     
 0.533
cce_4999
Hypothetical protein.
       0.529
cce_4364
Hypothetical protein; Contains UPF0150.
  
   
 0.519
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.