STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_5032Putative cobyrinic acid a,c-diamide synthase. (252 aa)    
Predicted Functional Partners:
cce_5033
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 0.965
cce_4884
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 0.912
cce_5031
Putative HAD-superfamily hydrolase, subfamily IA, variant 3.
       0.671
cce_4120
Unknown; Contains a cobyrinic acid a,c-diamide synthase domain.
  
     0.667
cce_3783
Hypothetical protein; Contains a DNA methylase N-4/N-6 domain.
  
 
 0.524
cce_5030
Hypothetical protein.
       0.462
cce_2679
Hypothetical protein.
  
 
 0.448
dnaA
Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
 
 
 0.448
cce_1549
Hypothetical protein.
  
 
 0.444
bacA
Probable bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
     0.408
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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