cce_5061 protein (Crocosphaera subtropica) - STRING interaction network

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cce_5061

Putative exoribonuclease II. (420 aa)

Predicted Functional Partners:

cce_0113

0.976

cce_5063

0.919

cce_3157

0.901

rnb

0.754

rnd

0.752

rph

0.747

cce_5005

0.618

rps17

0.604

rps18

0.534

rps7

0.532

Your Current Organism:

Crocosphaera subtropica

NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cce_0113	cce_3157	cce_0113	cce_3157	Putative transport protein; Belongs to the RNR ribonuclease family.	Ribonuclease II-like protein.	0.930
cce_0113	cce_5005	cce_0113	cce_5005	Putative transport protein; Belongs to the RNR ribonuclease family.	Hypothetical protein; Contains Helicase, C-terminal, Type III restriction enzyme, res subunit and DEAD/DEAH box helicase, N-terminal domains.	0.618
cce_0113	cce_5061	cce_0113	cce_5061	Putative transport protein; Belongs to the RNR ribonuclease family.	Putative exoribonuclease II.	0.976
cce_0113	cce_5063	cce_0113	cce_5063	Putative transport protein; Belongs to the RNR ribonuclease family.	Putative exonuclease.	0.775
cce_0113	rnd	cce_0113	cce_1016	Putative transport protein; Belongs to the RNR ribonuclease family.	Ribonuclease D.	0.752
cce_0113	rph	cce_0113	cce_4524	Putative transport protein; Belongs to the RNR ribonuclease family.	Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.	0.747
cce_0113	rps17	cce_0113	cce_4023	Putative transport protein; Belongs to the RNR ribonuclease family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.615
cce_0113	rps18	cce_0113	cce_3347	Putative transport protein; Belongs to the RNR ribonuclease family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.534
cce_0113	rps7	cce_0113	cce_4090	Putative transport protein; Belongs to the RNR ribonuclease family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.532
cce_3157	cce_0113	cce_3157	cce_0113	Ribonuclease II-like protein.	Putative transport protein; Belongs to the RNR ribonuclease family.	0.930
cce_3157	cce_5005	cce_3157	cce_5005	Ribonuclease II-like protein.	Hypothetical protein; Contains Helicase, C-terminal, Type III restriction enzyme, res subunit and DEAD/DEAH box helicase, N-terminal domains.	0.618
cce_3157	cce_5061	cce_3157	cce_5061	Ribonuclease II-like protein.	Putative exoribonuclease II.	0.901
cce_3157	rnd	cce_3157	cce_1016	Ribonuclease II-like protein.	Ribonuclease D.	0.752
cce_3157	rph	cce_3157	cce_4524	Ribonuclease II-like protein.	Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.	0.747
cce_3157	rps17	cce_3157	cce_4023	Ribonuclease II-like protein.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.618
cce_3157	rps18	cce_3157	cce_3347	Ribonuclease II-like protein.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.534
cce_3157	rps7	cce_3157	cce_4090	Ribonuclease II-like protein.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.532
cce_5005	cce_0113	cce_5005	cce_0113	Hypothetical protein; Contains Helicase, C-terminal, Type III restriction enzyme, res subunit and DEAD/DEAH box helicase, N-terminal domains.	Putative transport protein; Belongs to the RNR ribonuclease family.	0.618
cce_5005	cce_3157	cce_5005	cce_3157	Hypothetical protein; Contains Helicase, C-terminal, Type III restriction enzyme, res subunit and DEAD/DEAH box helicase, N-terminal domains.	Ribonuclease II-like protein.	0.618
cce_5005	cce_5061	cce_5005	cce_5061	Hypothetical protein; Contains Helicase, C-terminal, Type III restriction enzyme, res subunit and DEAD/DEAH box helicase, N-terminal domains.	Putative exoribonuclease II.	0.618

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