STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYK46776.1NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)    
Predicted Functional Partners:
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.800
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
 0.769
KYK46774.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.753
KYK43302.1
5,6-dimethylbenzimidazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.687
KYK49485.1
Bifunctional riboflavin kinase/FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.
    
 0.663
KYK46777.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
KYK44502.1
Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.625
KYK49669.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.625
KYK47812.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.625
KYK47828.1
5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.625
Your Current Organism:
Bradyrhizobium liaoningense
NCBI taxonomy Id: 43992
Other names: ATCC 700350, B. liaoningense, Bradyrhizobium sp. 4345, Bradyrhizobium sp. Spr3-7, CIP 104858, LMG 18230, LMG:18230, NBRC 100396, strain 2281
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