STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYK46788.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family. (133 aa)    
Predicted Functional Partners:
gshB
Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.
 
     0.816
rsmI
rRNA (cytidine-2'-O-)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.800
KYK44133.1
Competence protein ComF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.651
KYK46796.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.619
KYK49678.1
DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.606
KYK47811.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.587
KYK46559.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.582
KYK46786.1
Ethanolamine utilization protein EutM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.495
KYK49823.1
Flagellar biosynthesis protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
    0.489
flgL
Flagellar biosynthesis protein FlgL; With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.489
Your Current Organism:
Bradyrhizobium liaoningense
NCBI taxonomy Id: 43992
Other names: ATCC 700350, B. liaoningense, Bradyrhizobium sp. 4345, Bradyrhizobium sp. Spr3-7, CIP 104858, LMG 18230, LMG:18230, NBRC 100396, strain 2281
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