STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYK45970.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)    
Predicted Functional Partners:
KYK45703.1
Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
KYK45702.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
KYK45701.1
CtpF protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.992
KYK45699.1
Flp pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.989
KYK45698.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
KYK46793.1
CtpF protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.978
KYK46790.1
Flp pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.975
KYK50281.1
Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
KYK50280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
KYK45969.1
Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
 
  
 0.945
Your Current Organism:
Bradyrhizobium liaoningense
NCBI taxonomy Id: 43992
Other names: ATCC 700350, B. liaoningense, Bradyrhizobium sp. 4345, Bradyrhizobium sp. Spr3-7, CIP 104858, LMG 18230, LMG:18230, NBRC 100396, strain 2281
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.