STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000819765_00548Hypothetical protein. (56 aa)    
Predicted Functional Partners:
GCA_000819765_02092
Cytochrome c-555.
    
   0.795
GCA_000819765_01596
Hypothetical protein.
  
 
   0.738
GCA_000819765_00035
Hypothetical protein.
    
   0.703
GCA_000819765_00921
Hypothetical protein.
    
   0.703
yfhL
Putative ferredoxin-like protein YfhL.
    
   0.703
nrdG
Anaerobic ribonucleoside-triphosphate reductase-activating protein.
       0.602
Your Current Organism:
Aeromonas bivalvium
NCBI taxonomy Id: 440079
Other names: A. bivalvium, Aeromonas bivalvium Minana-Galbis et al. 2007, Aeromonas sp. 665N, Aeromonas sp. 868E, CECT 7113, LMG 23376, LMG:23376, strain 868E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.