STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000819765_03390Hypothetical protein. (145 aa)    
Predicted Functional Partners:
speG_2
Spermidine N(1)-acetyltransferase.
  
    0.703
nadE
Glutamine-dependent NAD(+) synthetase.
    
 0.648
gcvP
Glycine dehydrogenase (decarboxylating).
    
  0.618
metH
Methionine synthase.
    
 0.605
fumB
Fumarate hydratase class I, anaerobic.
    
  0.574
thiE
Thiamine-phosphate synthase.
  
 
 0.505
folE
GTP cyclohydrolase 1.
  
 
 0.487
pncB
Nicotinate phosphoribosyltransferase.
    
 0.478
nadC
Nicotinate-nucleotide pyrophosphorylase [carboxylating].
    
 0.469
GCA_000819765_03391
Hypothetical protein.
       0.464
Your Current Organism:
Aeromonas bivalvium
NCBI taxonomy Id: 440079
Other names: A. bivalvium, Aeromonas bivalvium Minana-Galbis et al. 2007, Aeromonas sp. 665N, Aeromonas sp. 868E, CECT 7113, LMG 23376, LMG:23376, strain 868E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.