STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMO_00146Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (292 aa)    
Predicted Functional Partners:
OMO_00147
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
OMO_00148
Unannotated protein.
 
 0.999
OMO_00145
Unannotated protein.
 
 
 0.998
OMO_00149
Unannotated protein.
 
 0.997
OMO_00150
Unannotated protein.
 
    0.917
OMO_00151
Unannotated protein.
       0.773
OMO_00144
Unannotated protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.483
Your Current Organism:
Enterococcus cecorum
NCBI taxonomy Id: 44008
Other names: ATCC 43198, CCUG 27299, CIP 103676, DSM 20682, E. cecorum, JCM 8724, LMG 12902, LMG:12902, NBRC 100674, NCDO 2674, NCIMB 702674, NCTC 12421, Streptococcus cecorum, strain A60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.