OMO_00167 protein (Enterococcus cecorum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OMO_00167

Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (311 aa)

Predicted Functional Partners:

OMO_00166

0.999

OMO_00168

0.999

pstB

0.999

pstB-2

0.998

OMO_00981

0.992

OMO_00171

0.965

OMO_00172

0.513

OMO_00173

0.490

OMO_00174

0.483

OMO_01556

0.402

Your Current Organism:

Enterococcus cecorum

NCBI taxonomy Id: 44008
Other names: ATCC 43198, CCUG 27299, CIP 103676, DSM 20682, E. cecorum, JCM 8724, LMG 12902, LMG:12902, NBRC 100674, NCDO 2674, NCIMB 702674, NCTC 12421, Streptococcus cecorum, strain A60

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OMO_00166	OMO_00167	GCA_001318175_00534	GCA_001318175_00535	Unannotated protein.	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.999
OMO_00166	OMO_00168	GCA_001318175_00534	GCA_001318175_00536	Unannotated protein.	Unannotated protein.	0.999
OMO_00166	OMO_00171	GCA_001318175_00534	GCA_001318175_00539	Unannotated protein.	Unannotated protein; Plays a role in the regulation of phosphate uptake.	0.923
OMO_00166	OMO_00172	GCA_001318175_00534	GCA_001318175_00540	Unannotated protein.	Unannotated protein.	0.412
OMO_00166	OMO_00981	GCA_001318175_00534	GCA_001318175_02026	Unannotated protein.	Unannotated protein.	0.888
OMO_00166	pstB	GCA_001318175_00534	GCA_001318175_00537	Unannotated protein.	Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.997
OMO_00166	pstB-2	GCA_001318175_00534	GCA_001318175_00538	Unannotated protein.	Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.995
OMO_00167	OMO_00166	GCA_001318175_00535	GCA_001318175_00534	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein.	0.999
OMO_00167	OMO_00168	GCA_001318175_00535	GCA_001318175_00536	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein.	0.999
OMO_00167	OMO_00171	GCA_001318175_00535	GCA_001318175_00539	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein; Plays a role in the regulation of phosphate uptake.	0.965
OMO_00167	OMO_00172	GCA_001318175_00535	GCA_001318175_00540	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein.	0.513
OMO_00167	OMO_00173	GCA_001318175_00535	GCA_001318175_00541	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein.	0.490
OMO_00167	OMO_00174	GCA_001318175_00535	GCA_001318175_00542	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein.	0.483
OMO_00167	OMO_00981	GCA_001318175_00535	GCA_001318175_02026	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein.	0.992
OMO_00167	OMO_01556	GCA_001318175_00535	GCA_001318175_01471	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein.	0.402
OMO_00167	pstB	GCA_001318175_00535	GCA_001318175_00537	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.999
OMO_00167	pstB-2	GCA_001318175_00535	GCA_001318175_00538	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.998
OMO_00168	OMO_00166	GCA_001318175_00536	GCA_001318175_00534	Unannotated protein.	Unannotated protein.	0.999
OMO_00168	OMO_00167	GCA_001318175_00536	GCA_001318175_00535	Unannotated protein.	Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.999
OMO_00168	OMO_00171	GCA_001318175_00536	GCA_001318175_00539	Unannotated protein.	Unannotated protein; Plays a role in the regulation of phosphate uptake.	0.995

page 1 of 5

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Databases

Cooccurrence

Textmining

Coexpression

Experiments

Fusion

© STRING Consortium 2023

Credits

Access

Info

About