STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMO_01817Unannotated protein. (265 aa)    
Predicted Functional Partners:
OMO_01816
Unannotated protein.
 
 
 0.995
OMO_01383
Unannotated protein.
    
  0.951
OMO_01222
Unannotated protein.
 
 
 0.819
GCA_001318175_01445
Unannotated protein.
 
 
 0.813
OMO_01599
Unannotated protein.
  
 
 0.787
OMO_01021
Unannotated protein.
  
 
 0.787
OMO_01158
Unannotated protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.757
OMO_01010
Unannotated protein.
  
 
 0.713
OMO_01009
Unannotated protein.
  
 
 0.713
OMO_00494
Unannotated protein.
 
 
 0.681
Your Current Organism:
Enterococcus cecorum
NCBI taxonomy Id: 44008
Other names: ATCC 43198, CCUG 27299, CIP 103676, DSM 20682, E. cecorum, JCM 8724, LMG 12902, LMG:12902, NBRC 100674, NCDO 2674, NCIMB 702674, NCTC 12421, Streptococcus cecorum, strain A60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.