STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMO_01695Unannotated protein. (227 aa)    
Predicted Functional Partners:
OMO_02246
Unannotated protein.
 
 
 0.857
OMO_00616
Unannotated protein.
 
  
 0.808
OMO_01691
Unannotated protein; Belongs to the Dps family.
     
 0.793
OMO_00668
Unannotated protein.
 
  
 0.674
OMO_02247
Unannotated protein.
 
  
 0.645
OMO_02248
Unannotated protein.
 
  
 0.623
OMO_00229
Unannotated protein.
       0.598
OMO_00618
Unannotated protein.
   
  
 0.596
OMO_01586
Unannotated protein.
   
  
 0.484
OMO_02251
Unannotated protein.
  
  
 0.468
Your Current Organism:
Enterococcus cecorum
NCBI taxonomy Id: 44008
Other names: ATCC 43198, CCUG 27299, CIP 103676, DSM 20682, E. cecorum, JCM 8724, LMG 12902, LMG:12902, NBRC 100674, NCDO 2674, NCIMB 702674, NCTC 12421, Streptococcus cecorum, strain A60
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.