STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMO_01200Unannotated protein; Belongs to the ABC transporter superfamily. (367 aa)    
Predicted Functional Partners:
OMO_02441
Unannotated protein.
 
 0.993
OMO_02440
Unannotated protein.
 
 0.990
OMO_01014
Unannotated protein.
 
 0.989
OMO_01012
Unannotated protein.
 
 0.989
GCA_001318175_02132
Unannotated protein.
 
 0.989
OMO_01013
Unannotated protein.
 
 0.981
GCA_001318175_02131
Unannotated protein.
 
 0.979
OMO_01702
Unannotated protein.
 
 0.973
OMO_01701
Unannotated protein.
 0.972
OMO_01024
Unannotated protein.
 
 0.968
Your Current Organism:
Enterococcus cecorum
NCBI taxonomy Id: 44008
Other names: ATCC 43198, CCUG 27299, CIP 103676, DSM 20682, E. cecorum, JCM 8724, LMG 12902, LMG:12902, NBRC 100674, NCDO 2674, NCIMB 702674, NCTC 12421, Streptococcus cecorum, strain A60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.