Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OJG40173.1Two-component system response regulator. (227 aa)    
Predicted Functional Partners:
OJG40174.1
Two-component system histidine kinase.
 
 0.956
OJG37756.1
Hypothetical protein.
 
 0.882
OJG39694.1
Two-component system sensor histidine kinase.
 
 
 0.804
OJG38953.1
PAS domain two-component system sensor histidine kinase.
 
 0.801
OJG38175.1
Histidine kinase.
 
 0.796
OJG38584.1
Hypothetical protein.
 
 
 0.791
OJG38025.1
Two-component system sensor histidine kinase.
 
 
 0.766
OJG40172.1
Multicopper oxidase.
  
  
 0.711
OJG37683.1
Two-component system sensor histidine kinase.
 
 0.699
sigA
RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.666
Your Current Organism:
Enterococcus dispar
NCBI taxonomy Id: 44009
Other names: ATCC 51266, CCUG 33309, CIP 103646, DSM 6630, E. dispar, HAMBI 2231, LMG 13521, LMG:13521, NBRC 100678, NCFB 2821, NCIMB 13000, strain E18-1
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