STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWC00_01950Cyclase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (871 aa)    
Predicted Functional Partners:
ORV44069.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.937
ORV42674.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.937
ORV35447.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.891
ORV33371.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.882
ORV39422.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.860
ORV37881.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.851
ORV33408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.851
ORV41519.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.844
ORV33409.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.828
ORV44091.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.788
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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