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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhmAHaloalkane dehalogenase; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. (302 aa)    
Predicted Functional Partners:
ORV38198.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.889
ORV40490.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
ORV42597.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
ORV41575.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
ORV40071.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
ORV36772.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
tadA
CMP deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      0.816
ORV46625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.698
ORV46663.1
S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.698
ORV44813.1
acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.681
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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