STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORV46778.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)    
Predicted Functional Partners:
ORV46777.1
cyclohexanecarboxylate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
ORV46779.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.531
eis
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
ORV33449.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  0.469
ORV45843.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
  0.464
ORV40111.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
  0.464
ORV38562.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.443
ORV33427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.443
ORV41764.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.430
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.