STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV46416.1Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)    
Predicted Functional Partners:
ORV46444.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.970
ORV46412.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.963
ORV46411.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.958
ORV46413.1
MCE-family protein MCE3A; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.956
ORV46414.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.944
ORV35170.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.935
ORV41426.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.935
ORV46418.1
Mce protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.934
AWC00_07360
Mce protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.927
ORV44267.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.924
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.