STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORV46120.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)    
Predicted Functional Partners:
ORV43564.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.770
ORV37772.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.744
ORV46290.1
Cyclodehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
ORV35479.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
ORV46119.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.612
ORV38425.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
ORV37773.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
ORV44273.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.507
ORV43557.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.494
ORV36270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.494
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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