STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORV44172.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (132 aa)    
Predicted Functional Partners:
ORV41795.1
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.731
ORV44173.1
Glucose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.581
ORV44218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
ORV38259.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.471
ORV41944.1
Aminobenzoate oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
ORV44174.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.443
ORV38278.1
beta-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
ORV44217.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.435
ORV32657.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 4-oxalocrotonate tautomerase family.
  
     0.431
ORV38260.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.423
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.