STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
narYNitrate reductase; With NarZV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)    
Predicted Functional Partners:
ORV44176.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
ORV44178.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
ORV44179.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ORV45415.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.967
ORV45400.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.967
ORV45404.1
Nitrite reductase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.939
ORV45416.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.927
ORV43571.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.897
ORV45946.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.837
ORV45012.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.837
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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