Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ORV36638.1 | ORV43713.1 | AWC00_24185 | AWC00_08285 | Nucleoid-associated protein Lsr2; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.778 |
| ORV39948.1 | ORV43713.1 | AWC00_17215 | AWC00_08285 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.722 |
| ORV39948.1 | ORV47221.1 | AWC00_17215 | AWC00_02000 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| ORV39948.1 | pheT | AWC00_17215 | AWC00_18835 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.736 |
| ORV43222.1 | ORV43713.1 | AWC00_09970 | AWC00_08285 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.607 |
| ORV43222.1 | polA | AWC00_09970 | AWC00_19005 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.686 |
| ORV43222.1 | rpsO | AWC00_09970 | AWC00_26750 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.966 |
| ORV43222.1 | rpsT | AWC00_09970 | AWC00_00400 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.965 |
| ORV43713.1 | ORV36638.1 | AWC00_08285 | AWC00_24185 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Nucleoid-associated protein Lsr2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
| ORV43713.1 | ORV39948.1 | AWC00_08285 | AWC00_17215 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.722 |
| ORV43713.1 | ORV43222.1 | AWC00_08285 | AWC00_09970 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.607 |
| ORV43713.1 | ORV47221.1 | AWC00_08285 | AWC00_02000 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.722 |
| ORV43713.1 | dnaA | AWC00_08285 | AWC00_16800 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Chromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.794 |
| ORV43713.1 | nusA | AWC00_08285 | AWC00_26850 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.673 |
| ORV43713.1 | pheT | AWC00_08285 | AWC00_18835 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.625 |
| ORV43713.1 | polA | AWC00_08285 | AWC00_19005 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.621 |
| ORV43713.1 | rpsO | AWC00_08285 | AWC00_26750 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.699 |
| ORV43713.1 | rpsT | AWC00_08285 | AWC00_00400 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.724 |
| ORV47221.1 | ORV39948.1 | AWC00_02000 | AWC00_17215 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| ORV47221.1 | ORV43713.1 | AWC00_02000 | AWC00_08285 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.722 |
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