STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV42677.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)    
Predicted Functional Partners:
ORV42674.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ORV44069.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
ORV35447.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
ORV42676.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
ORV42675.1
Stage II sporulation protein M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
ORV41780.1
PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.890
ORV42678.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.887
ORV43798.1
Regulator of Sig8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.846
ORV42673.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.819
ORV46309.1
Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.782
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.