STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV41930.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)    
Predicted Functional Partners:
eis
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.768
ORV41931.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.764
ORV41928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.731
eis-2
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.700
ORV41927.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.670
ORV33445.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.603
ORV32433.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
ORV33853.1
Fluoroquinolone transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.565
ORV41929.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
ORV37636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.538
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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