STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV40951.1CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa)    
Predicted Functional Partners:
ORV40952.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
ORV42141.1
Plasmid stabilization protein ParE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RelE toxin family.
 
 
 0.932
ORV36253.1
Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.747
ORV46214.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.424
ORV40950.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.422
ORV45932.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.412
cobB
NAD-dependent deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
   
    0.412
cobB-2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.412
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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