STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV39842.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)    
Predicted Functional Partners:
ORV39840.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.957
ORV39841.1
decaprenylphosphoryl-beta-D-ribose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.957
ORV39838.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.953
ORV39839.1
Arabinofuranosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.903
ORV39843.1
Nucleoside diphosphate kinase regulator; Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.846
ORV40075.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.758
ORV39834.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.754
ORV40073.1
Phosphoribose diphosphate--decaprenyl-phosphate phosphoribosyltransferase; Catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiA prenyltransferase family.
 
     0.742
ORV42277.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.712
ORV39844.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.708
Your Current Organism:
Mycobacterium conspicuum
NCBI taxonomy Id: 44010
Other names: ATCC 700090, CIP 105165, DSM 44136, JCM 14738, M. conspicuum, strain 3895/92
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